WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030496 Gene Name  Cbr-frm-1
Sequence Name  ? CBG08758 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable actin binding activity and structural molecule activity. Predicted to be located in cytoskeleton. Is an ortholog of C. elegans frm-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08758b.1 CBG08758b.1   [unknown]
Transcript:CBG08758a.1 CBG08758a.1   [unknown]
Transcript:CBG08758e.1 CBG08758e.1   [unknown]
Transcript:CBG08758d.1 CBG08758d.1   [unknown]
Transcript:CBG08758c.1 CBG08758c.1   [unknown]
 

Other

5 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08758a CBG08758a   [unknown]
CDS:CBG08758e CBG08758e   [unknown]
CDS:CBG08758d CBG08758d   [unknown]
CDS:CBG08758c CBG08758c   [unknown]
CDS:CBG08758b CBG08758b   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00010277
WBVar00010282

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-frm-1, CAAATGAATCCGGATATGGTTGTGGAGAAGATTGAAGTCCGCCAGGAGACTACTCAATAA, WBGene00030496   Expr1062276 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  located_in
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term