WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031541 Gene Name  CBG10060
Sequence Name  ? CBG10060 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable 3'-5' exonuclease activity and nucleic acid binding activity. Predicted to be involved in nucleobase-containing compound metabolic process. Is an ortholog of C. elegans ZK1098.3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10060a.1 CBG10060a.1   [unknown]
Transcript:CBG10060b.1 CBG10060b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10060a CBG10060a   [unknown]
CDS:CBG10060b CBG10060b   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00115527
WBVar00115528
WBVar00115529
WBVar00115530
WBVar00115531
WBVar00115532
WBVar00115533
WBVar00115534
WBVar00115535

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG10060, TACCAGAAATCCGTTGGAACATCTAGGAAACTTTTTGAACTTTTTCAATTTGGATATTCG, WBGene00031541   Expr1064400 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term