WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031606 Gene Name  Cbr-fozi-1
Sequence Name  ? CBG10136 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in cytoskeleton organization and regulation of cell morphogenesis. Is an ortholog of C. elegans fozi-1. In C. elegans, fozi-1 is involved in mesodermal cell fate specification and positive regulation of mesodermal cell fate specification. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10136a.1 CBG10136a.1   [unknown]
Transcript:CBG10136b.1 CBG10136b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10136b CBG10136b   [unknown]
CDS:CBG10136a CBG10136a   [unknown]

0 RNAi Result

4 Allele

Public Name
WBVar00007164
WBVar00007154
WBVar00007159
WBVar00115571

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-fozi-1, TCCATCTTCTTCGTTCCCTAAAAACTGCCATCGAGCTCAACGAAACTTCCGAAGAACAAC, WBGene00031606   Expr1059508 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term