WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032220 Gene Name  Cbr-unc-10
Sequence Name  ? CBG11009 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable small GTPase binding activity. Predicted to be involved in exocytosis. Predicted to be located in membrane. Is an ortholog of C. elegans unc-10. In C. elegans, unc-10 is involved in several processes, including chemical synaptic transmission; defecation; and positive regulation of cholinergic synaptic transmission. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11009b.1 CBG11009b.1   [unknown]
Transcript:CBG11009a.1 CBG11009a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11009a CBG11009a   [unknown]
CDS:CBG11009b CBG11009b   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00116380
WBVar00116379

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-unc-10, CGAACTTGGATCTCAACCGTTAATAGGATGGTACAAGTTATTTCATAGCTCCTCATTGGC, WBGene00032220   Expr1051644 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term