WormMine: Gene WBGene00033092

• WormBase Gene ID: WBGene00033092
• Gene Name: CBG12088
• Sequence Name: CBG12088
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to enable orotate phosphoribosyltransferase activity. Is an ortholog of C. elegans R12E2.11. In C. elegans, R12E2.11 is involved in UMP biosynthetic process.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG12088.1	CBG12088.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG12088	CBG12088		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in Cbr-spr-4(gu163) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-spr-4(gu163)_downregulated

1 Expression Patterns

• Primary Identifier: Expr1053306
• Remark: CBG12088, ACGATGGAAGGAATTCTTGACGGCCTCATCACAAAAAATGAGATGACTGAAGACCGGAAG, WBGene00033092
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

1 GO Annotation

0 Homologues

0 Locations

1 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term