WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034152 Gene Name  Cbr-mtcu-2
Sequence Name  ? CBG13376 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable flavin adenine dinucleotide binding activity. Predicted to be involved in tRNA wobble uridine modification. Is an ortholog of C. elegans mtcu-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13376.1 CBG13376.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13376 CBG13376   [unknown]

0 RNAi Result

12 Allele

Public Name
WBVar00119648
WBVar00119649
WBVar00119650
WBVar00119657
WBVar00119655
WBVar00119656
WBVar00119653
WBVar00119654
WBVar00119651
WBVar00119652
WBVar00119646
WBVar00119647

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG13376, TGGAATCACACCGGAAGCCATTGTGGTGCTGATGAGATATTTAAAGAGCCCCAGTCAAAT, WBGene00034152   Expr1051259 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term