WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034451 Gene Name  Cbr-pkd-2
Sequence Name  ? CBG13737 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable calcium ion binding activity. Predicted to be located in membrane. Is an ortholog of C. elegans pkd-2. In C. elegans, pkd-2 is involved in calcium ion transport; response to hermaphrodite contact; and vulval location. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13737.1 CBG13737.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13737 CBG13737   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pkd-2, CAAACGTCCAGATGGACCATCAGAGGATGCAACTTATGAGGATTACAAGATCATGTTGTA, WBGene00034451   Expr1059648 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term