WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036188 Gene Name  Cbr-apa-2
Sequence Name  ? CBG16158 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable clathrin adaptor activity. Predicted to be involved in clathrin-dependent endocytosis and intracellular protein transport. Predicted to be part of AP-2 adaptor complex. Is an ortholog of C. elegans apa-2. In C. elegans, apa-2 is involved in embryo development; endocytosis; and protein localization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16158.1 CBG16158.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16158 CBG16158   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-apa-2, CGCTCCAGCAAGGACACAGTCGTGCAGACATTGGTCGACTTATTGGGCAACCAATTTTAA, WBGene00036188   Expr1052195 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

8 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  part_of
  part_of
  part_of

0 Homologues

0 Locations

8 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  part_of
  part_of
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term