WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036319 Gene Name  Cbr-cah-3
Sequence Name  ? CBG16360 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable carbonate dehydratase activity and zinc ion binding activity. Is an ortholog of C. elegans cah-3. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16360b.1 CBG16360b.1   [unknown]
Transcript:CBG16360a.2 CBG16360a.2   [unknown]
Transcript:CBG16360a.1 CBG16360a.1   [unknown]
Transcript:CBG16360a.3 CBG16360a.3   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16360b CBG16360b   [unknown]
CDS:CBG16360a CBG16360a   [unknown]

0 RNAi Result

4 Allele

Public Name
WBVar00056008
WBVar00024864
WBVar00024869
WBVar00021112

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-cah-3, GTAACCCATGATCAGCTGGAGCTATTCCGTCAAGTTCAGGATATTGATAAGCGTCCAATC, WBGene00036319   Expr1053935 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term