WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037354 Gene Name  Cbr-fce-2.3
Sequence Name  ? CBG17836 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metalloendopeptidase activity. Predicted to be involved in CAAX-box protein processing. Predicted to be located in endoplasmic reticulum membrane. Is an ortholog of C. elegans fce-2. In C. elegans, fce-2 is involved in CAAX-box protein processing. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17836c.1 CBG17836c.1   [unknown]
Transcript:CBG17836d.1 CBG17836d.1   [unknown]
Transcript:CBG17836a.1 CBG17836a.1   [unknown]
Transcript:CBG17836b.1 CBG17836b.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17836d CBG17836d   [unknown]
CDS:CBG17836c CBG17836c   [unknown]
CDS:CBG17836b CBG17836b   [unknown]
CDS:CBG17836a CBG17836a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17836, CAATTGCAGACGAAACACGCGATGGTGCCGATCATTGCTCATACGATCTGTAATGCACAG, WBGene00037354   Expr1053078 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term