WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038390 Gene Name  CBG19118
Sequence Name  ? CBG19118 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable mannose-6-phosphate isomerase activity and zinc ion binding activity. Predicted to be involved in GDP-mannose biosynthetic process and carbohydrate metabolic process. Is an ortholog of C. elegans C05C8.7. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19118.1 CBG19118.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19118 CBG19118   [unknown]

0 RNAi Result

17 Allele

Public Name
WBVar00127228
WBVar00127227
WBVar00127222
WBVar00127221
WBVar00127220
WBVar00127226
WBVar00127225
WBVar00127224
WBVar00127223
WBVar00127219
WBVar00127218
WBVar00127217
WBVar00127216
WBVar00127215
WBVar00127214
WBVar00127213
WBVar00127212

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG19118, TCTCGTTGTGGTCAGTGGAAAAGGAACGATCGAGGAGGCGACACAAGAAAATCAGCTGAT, WBGene00038390   Expr1062416 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term