WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038800 Gene Name  Cbr-pinn-1
Sequence Name  ? CBG19616 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Is an ortholog of C. elegans pinn-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19616.1 CBG19616.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19616 CBG19616   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00007429
WBVar00007419
WBVar00007424
WBVar00007404
WBVar00007409
WBVar00007414
WBVar00007394
WBVar00007399

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG19616, GAGATGTCCGACATAGTCGACACCGATTCTGGAGTTCATCTCATCTACCGTATTGCTTAA, WBGene00038800   Expr1068079 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term