WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039704 Gene Name  CBG20782
Sequence Name  ? CBG20782 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable calmodulin-lysine N-methyltransferase activity and protein heterodimerization activity. Predicted to be located in cytoplasm. Predicted to be part of FANCM-MHF complex. Is an ortholog of C. elegans Y48E1C.1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20782b.1 CBG20782b.1   [unknown]
Transcript:CBG20782.1 CBG20782.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20782b CBG20782b   [unknown]
CDS:CBG20782 CBG20782   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00029767

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG20782, TCAATTCGATTCTCGATAAGAAGATTGGGAGAATTTGGAGTAGCGGTGAAGAGAAGGATG, WBGene00039704   Expr1058311 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  located_in
  part_of

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  located_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term