WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040062 Gene Name  CBG21221
Sequence Name  ? CBG21221 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable glucosamine-6-phosphate deaminase activity. Predicted to be involved in N-acetylglucosamine metabolic process and carbohydrate metabolic process. Is an ortholog of C. elegans T03F6.3. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21221.1 CBG21221.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21221 CBG21221   [unknown]

0 RNAi Result

3 Allele

Public Name
WBVar00030507
WBVar00030512
WBVar00030517

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG21221, CCTTCATCAGGCAATCGAATGCGGTGTCTCTCATATGTGTACAGTATCCGCAATGCAAAT, WBGene00040062   Expr1059833 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term