WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040367 Gene Name  Cbr-cpin-1
Sequence Name  ? CBG21661 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds. Is an ortholog of C. elegans cpin-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21661b.1 CBG21661b.1   [unknown]
Transcript:CBG21661a.1 CBG21661a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21661b CBG21661b   [unknown]
CDS:CBG21661a CBG21661a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-cpin-1, GGACTCTCCACTTTTCGCCAACTCTCTCGCCGACACACTCATTGATTCTCTAGTGCTCTC, WBGene00040367   Expr1066044 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term