WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041180 Gene Name  Cbr-dcaf-1
Sequence Name  ? CBG22664 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in protein ubiquitination. Is an ortholog of C. elegans dcaf-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22664.1 CBG22664.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22664 CBG22664   [unknown]

0 RNAi Result

16 Allele

Public Name
WBVar00003194
WBVar00030459
WBVar00003199
WBVar00030464
WBVar00132296
WBVar00132297
WBVar00030469
WBVar00132300
WBVar00132301
WBVar00132298
WBVar00132299
WBVar00132302
WBVar00030444
WBVar00132303
WBVar00030449
WBVar00030454

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG22664, GAACAGGTGAAACCACAAGTCAACGACTACATGGTCCAATCATCCACCCAAATGCGGATG, WBGene00041180   Expr1052782 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term