WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041677 Gene Name  Cbr-sipa-1
Sequence Name  ? CBG23298 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable GTPase activator activity. Predicted to be involved in regulation of small GTPase mediated signal transduction. Is an ortholog of C. elegans sipa-1. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23298a.1 CBG23298a.1   [unknown]
Transcript:CBG23298b.1 CBG23298b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23298a CBG23298a   [unknown]
CDS:CBG23298b CBG23298b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG23298, AAGTCCTCGTCGTGGATGTGAAGATCCAAACTGTCCAGCAGTGAAGGGAATCGAGCAAAT, WBGene00041677   Expr1050232 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term