WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042479 Gene Name  Cbr-catp-7
Sequence Name  ? CBG24344 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity; ATP hydrolysis activity; and P-type transmembrane transporter activity. Predicted to be located in membrane. Is an ortholog of C. elegans catp-7. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24344.1 CBG24344.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24344 CBG24344   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00134025
WBVar00134026
WBVar00134027
WBVar00134028
WBVar00134029
WBVar00134030
WBVar00134031
WBVar00025694
WBVar00057029
WBVar00057034
WBVar00057039
WBVar00057044
WBVar00057049

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG24344, GCTCTTGTCACTTCTTACTCCGCATTCCTCTGTATGGCTGGCTACTCTCTAACCCAATTC, WBGene00042479   Expr1064859 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  enables
  located_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term