WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00052087 Gene Name  Cre-gap-1
Sequence Name  ? CRE00466 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Rho GTPase activation protein; GTPase-activator protein for Ras-like GTPase; Ras GTPase-activating domain; Ras GTPase-activating protein; Pleckstrin homology domain; PH domain; and PH-like domain superfamily. Is an ortholog of C. elegans gap-1. In C. elegans, gap-1 is involved in chemosensory behavior; learning or memory; and negative regulation of Ras protein signal transduction. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE00466.1 CRE00466.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE00466 CRE00466   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-gap-1, GTTCCACTATCGACGTCACGGATGCCATTCAACTAGCACATGAAGAATACGAGAAAGAGA, WBGene00052087   Expr1101864 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term