WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00059306 Gene Name  Cre-hars-1.1
Sequence Name  ? CRE11039 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable ATP binding activity and histidine-tRNA ligase activity. Predicted to be involved in histidyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Is an ortholog of C. elegans hars-1. In C. elegans, hars-1 is involved in germ cell development; nematode larval development; and translation. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE11039.1 CRE11039.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE11039 CRE11039   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-hars-1, GCTGAAGAGAGGCGTATCCCATTAGTTGTGCTTATTGGTGAAAGAGAACTTCAAGAGGGA, WBGene00059306   Expr1102352 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term