WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00098873 Gene Name  Ppa-tax-6
Sequence Name  ? PPA09319 Organism  Pristionchus pacificus
Automated Description  Predicted to enable calmodulin-dependent protein phosphatase activity. Predicted to be involved in calcineurin-mediated signaling. Is an ortholog of C. elegans tax-6. In C. elegans, tax-6 is involved in several processes, including determination of adult lifespan; male mating behavior; and response to temperature stimulus. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA09319b.1 PPA09319b.1   [unknown]
Transcript:PPA09319a.1 PPA09319a.1   [unknown]
Transcript:PPA09319d.1 PPA09319d.1   [unknown]
Transcript:PPA09319c.1 PPA09319c.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA09319a PPA09319a   [unknown]
CDS:PPA09319b PPA09319b   [unknown]
CDS:PPA09319c PPA09319c   [unknown]
CDS:PPA09319d PPA09319d   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term