WormMine: Gene WBGene00108032

• WormBase Gene ID: WBGene00108032
• Gene Name: PPA18478
• Sequence Name: PPA18478
• Organism: Pristionchus pacificus
• Automated Description: Predicted to enable nucleotide binding activity. Predicted to be involved in transcription initiation at RNA polymerase III promoter. Predicted to be part of RNA polymerase III complex. Is an ortholog of C. elegans M106.7.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Pristionchus pacificus
• Taxon Id: 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:PPA18478.1	PPA18478.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:PPA18478	PPA18478		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
Germline ablation	Genes that showed differential expression in the comparision of germline-ablated animals fed on E. coli OP50 versus un-ablated animals fed E. coli OP50.	Differential expression was calculated by empirical Bayes method using the eBayes function, and control of FDR was employed as the multiple testing correction. Authors used cutoff of absolute log2 fold change greater than or equal to 1.5 AND p_value less than or equal to 0.05 to call differentially expressed genes.	WBPaper00041466:PP_germline-ablation_regulated

0 Expression Patterns

6 GO Annotation

0 Homologues

0 Locations

6 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term