WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119329 Gene Name  Cjp-rom-2
Sequence Name  ? CJA00125 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to be located in membrane. Is an ortholog of C. elegans rom-2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00125c.1 CJA00125c.1   [unknown]
Transcript:CJA00125b.1 CJA00125b.1   [unknown]
Transcript:CJA00125a.1 CJA00125a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00125a CJA00125a   [unknown]
CDS:CJA00125b CJA00125b   [unknown]
CDS:CJA00125c CJA00125c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-rom-2, GGCTCGTTGGACTATGCGCTTGCCGTTTATCAACGCTTTTTTGCACCAAGAATTGATAAA, WBGene00119329   Expr1081390 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term