WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00125934 Gene Name  Cjp-ostd-1
Sequence Name  ? CJA06730 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in protein N-linked glycosylation. Predicted to be located in membrane. Predicted to be part of oligosaccharyltransferase complex. Is an ortholog of C. elegans ostd-1. In C. elegans, ostd-1 is involved in endoplasmic reticulum organization and regulation of cell division. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA06730.1 CJA06730.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA06730 CJA06730   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-ostd-1, CAAAATCGGAATCAACTTTGAGGAAGCTCCACTTTCCCTCTGGGTGCCAATCTTCCATTT, WBGene00125934   Expr1077334 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  located_in
  involved_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  located_in
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term