WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127044 Gene Name  Cjp-gcn-2
Sequence Name  ? CJA07840 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and eukaryotic translation initiation factor 2alpha kinase activity. Predicted to be involved in DNA damage checkpoint signaling. Is an ortholog of C. elegans gcn-2. In C. elegans, gcn-2 is involved in several processes, including determination of adult lifespan; positive regulation of protein modification process; and response to stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA07840.1 CJA07840.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA07840 CJA07840   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-gcn-2, GGAGCACAGCAAACTCGATTTGGTTTCCCTTCGCAAGCAACTTCGCTCAACTGTCAGCAA, WBGene00127044   Expr1076719 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term