WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00128081 Gene Name  CJA08877
Sequence Name  ? CJA08877 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable aminoacylase activity. Predicted to be involved in amino acid metabolic process. Predicted to be located in cytoplasm. Predicted to be part of ESCRT I complex. Is an ortholog of C. elegans C06A6.4. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08877a.1 CJA08877a.1   [unknown]
Transcript:CJA08877b.1 CJA08877b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08877a CJA08877a   [unknown]
CDS:CJA08877b CJA08877b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA08877, GGATGCAACTATAAAAAGGAAATCTTTATTGGGGCTACCGATTCGAGATTTGTTAGAGCG, WBGene00128081   Expr1085458 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-mvb-12, AAACGTTGGAATTCCACGTGTGAAAGCCATCGACGGCATAGATTTCAAACTGAATCCGTC, WBGene00136243   Expr1072282 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  part_of
  located_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  part_of
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term