WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00128084 Gene Name  CJA08882
Sequence Name  ? CJA08882 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable calmodulin-lysine N-methyltransferase activity and protein heterodimerization activity. Predicted to be located in cytoplasm. Predicted to be part of FANCM-MHF complex. Is an ortholog of C. elegans Y48E1C.1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08882b.1 CJA08882b.1   [unknown]
Transcript:CJA08882c.1 CJA08882c.1   [unknown]
Transcript:CJA08882a.1 CJA08882a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08882a CJA08882a   [unknown]
CDS:CJA08882b CJA08882b   [unknown]
CDS:CJA08882c CJA08882c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA07126, ACGCCTGGAAAGACGAACACGAGCGCGATGAAAAATTTCCTGTGATTTTGACAATTTCGC, WBGene00126330   Expr1087480 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  part_of
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  part_of
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term