WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00130035 Gene Name  Cjp-suf-1
Sequence Name  ? CJA10831 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in RNA processing. Predicted to be located in nucleus. Is an ortholog of C. elegans suf-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA10831a.1 CJA10831a.1   [unknown]
Transcript:CJA10831b.1 CJA10831b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA10831a CJA10831a   [unknown]
CDS:CJA10831b CJA10831b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-suf-1, GATAACAATACGCGAGTCGTTTTTGAACGGATTCTAACTTCTCTAAAGTTGACGTCGGAT, WBGene00130035   Expr1087163 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term