WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00132326 Gene Name  Cjp-rpom-1
Sequence Name  ? CJA13122 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA binding activity and DNA-directed 5'-3' RNA polymerase activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans rpom-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA13122.1 CJA13122.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA13122 CJA13122   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA13122, AAGGAGGAATTCAGGTTAACCTGACGCAAAGCGAACTTCCAAATGATGTGTACTCGGATG, WBGene00132326   Expr1071451 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA20024, CCTACGGAGGAATGCGAAAAGTTTGAGAACATTTTTACGGTCAAAGTTCGGCCAGGAGAG, WBGene00175595   Expr1091584 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA24642, TGGCAAGAGGAGTGAGTATAGACGGCTTAACCCTGTTGATCAATGCGGAAGATAAGAGTT, WBGene00180214   Expr1080179 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term