WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00133884 Gene Name  Cjp-gbb-2
Sequence Name  ? CJA14680 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable G protein-coupled GABA receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans gbb-2. In C. elegans, gbb-2 is involved in G protein-coupled receptor signaling pathway; negative regulation of cholinergic synaptic transmission; and response to xenobiotic stimulus. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA14680a.1 CJA14680a.1   [unknown]
Transcript:CJA14680b.1 CJA14680b.1   [unknown]
Transcript:CJA14680c.1 CJA14680c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA14680a CJA14680a   [unknown]
CDS:CJA14680b CJA14680b   [unknown]
CDS:CJA14680c CJA14680c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-gbb-2, TGTTATTCTCGAAATTCAGGAGTCTTCCAAGCGGTTTTGTATGCTGTCAAAGGAATTCTT, WBGene00133884   Expr1084056 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-trx-3, GGGGAGTCGTTCCGTTGAGAGATCCAATTATTGAAAAGTGCTTGAATGCGTATAATGTGA, WBGene00127262   Expr1076083 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  located_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term