WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00136347 Gene Name  Cjp-sart-3.1
Sequence Name  ? CJA17143 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable RNA binding activity. Predicted to be involved in transcription elongation by RNA polymerase II. Predicted to be part of Cdc73/Paf1 complex. Is an ortholog of C. elegans sart-3. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA17143.1 CJA17143.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA17143 CJA17143   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA20128, GAACACTATGAAGAGGACGAGGATGACGATCAAGTGAAGTTGGATGACGAGGGTAGAAAT, WBGene00175699   Expr1085823 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA17143, GTCACTCATCGTGACGGAAAACCGAAAGGTGTCGCCTATGTGGACTTTAAAACGGAAGAG, WBGene00136347   Expr1091361 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  part_of
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term