WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00211028 Gene Name  Cjp-rars-1.1
Sequence Name  ? CJA35181 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and arginine-tRNA ligase activity. Predicted to be involved in arginyl-tRNA aminoacylation. Is an ortholog of C. elegans rars-1. In C. elegans, rars-1 is involved in determination of adult lifespan; regulation of gene expression; and translation. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA35181b.1 CJA35181b.1   [unknown]
Transcript:CJA35181a.1 CJA35181a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA35181a CJA35181a   [unknown]
CDS:CJA35181b CJA35181b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-rars-1, ACTCGCCCTGTGCGATGTGACCGCCAACGTCATCTCGAAATGTTTCGAAATTCTTGGCAT, WBGene00123593   Expr1090395 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term