WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00214788 Gene Name  CJA38941
Sequence Name  ? CJA38941 Organism  Caenorhabditis japonica
Automated Description  Predicted to be an extracellular matrix structural constituent. Predicted to be part of collagen trimer. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA38941a.1 CJA38941a.1   [unknown]
Transcript:CJA38941b.1 CJA38941b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA38941b CJA38941b   [unknown]
CDS:CJA38941a CJA38941a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-emb-9, GATCAGGACAAGCAGTTCCGCAAGCCAATGTCGCAGACGCTCAAGGCCGGAGGACTCAAG, WBGene00130026   Expr1078179 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  part_of

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term