WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00222535 Gene Name  Bma-cdc-14
Sequence Name  ? Bm2274 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: Dual specificity phosphatase, catalytic domain; Protein-tyrosine phosphatase-like; Dual specificity protein phosphatase domain; and Tyrosine-protein phosphatase CDC14. Is an ortholog of C. elegans cdc-14. In C. elegans, cdc-14 is involved in several processes, including cytoskeleton-dependent cytokinesis; mitotic spindle midzone assembly; and regulation of cell cycle process. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

13 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm2274b.1 Bm2274b.1   [unknown]
Transcript:Bm2274a.1 Bm2274a.1   [unknown]
Transcript:Bm2274d.1 Bm2274d.1   [unknown]
Transcript:Bm2274c.1 Bm2274c.1   [unknown]
Transcript:Bm2274f.1 Bm2274f.1   [unknown]
Transcript:Bm2274e.1 Bm2274e.1   [unknown]
Transcript:Bm2274h.1 Bm2274h.1   [unknown]
Transcript:Bm2274g.1 Bm2274g.1   [unknown]
Transcript:Bm2274j.1 Bm2274j.1   [unknown]
Transcript:Bm2274i.1 Bm2274i.1   [unknown]
Transcript:Bm2274l.1 Bm2274l.1   [unknown]
Transcript:Bm2274k.1 Bm2274k.1   [unknown]
Transcript:Bm2274m.1 Bm2274m.1   [unknown]
 

Other

13 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm2274m Bm2274m   [unknown]
CDS:Bm2274l Bm2274l   [unknown]
CDS:Bm2274i Bm2274i   [unknown]
CDS:Bm2274h Bm2274h   [unknown]
CDS:Bm2274k Bm2274k   [unknown]
CDS:Bm2274j Bm2274j   [unknown]
CDS:Bm2274e Bm2274e   [unknown]
CDS:Bm2274d Bm2274d   [unknown]
CDS:Bm2274g Bm2274g   [unknown]
CDS:Bm2274f Bm2274f   [unknown]
CDS:Bm2274a Bm2274a   [unknown]
CDS:Bm2274c Bm2274c   [unknown]
CDS:Bm2274b Bm2274b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

4 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated
  Transcripts that showed significantly higher expression in L4 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Adult_Upregulated
  Transcripts that showed significantly higher expression in L4 larva comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Micro_Upregulated

0 Expression Patterns

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term