WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00224397 Gene Name  Bm4136
Sequence Name  ? Bm4136 Organism  Brugia malayi
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans Y38E10A.8 and pek-1. In C. elegans, pek-1 is involved in PERK-mediated unfolded protein response; nematode larval development; and regulation of macromolecule metabolic process. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm4136d.1 Bm4136d.1   [unknown]
Transcript:Bm4136c.3 Bm4136c.3   [unknown]
Transcript:Bm4136c.2 Bm4136c.2   [unknown]
Transcript:Bm4136c.1 Bm4136c.1   [unknown]
Transcript:Bm4136b.1 Bm4136b.1   [unknown]
Transcript:Bm4136a.1 Bm4136a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm4136b Bm4136b   [unknown]
CDS:Bm4136a Bm4136a   [unknown]
CDS:Bm4136d Bm4136d   [unknown]
CDS:Bm4136c Bm4136c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M30

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term