WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00226666 Gene Name  Bma-taf-2
Sequence Name  ? Bm6405 Organism  Brugia malayi
Automated Description  Predicted to enable metallopeptidase activity and zinc ion binding activity. Predicted to be part of transcription factor TFIID complex. Is an ortholog of C. elegans taf-2. In C. elegans, taf-2 is involved in embryo development and transcription initiation at RNA polymerase II promoter. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm6405.1 Bm6405.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm6405 Bm6405   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F120_vs_F30
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_M30

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  enables
  part_of
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  part_of
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term