WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00227612 Gene Name  Bma-zfh-2
Sequence Name  ? Bm7351 Organism  Brugia malayi
Automated Description  Predicted to enable DNA binding activity and zinc ion binding activity. Is an ortholog of C. elegans zfh-2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

16 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm7351f.1 Bm7351f.1   [unknown]
Transcript:Bm7351g.1 Bm7351g.1   [unknown]
Transcript:Bm7351h.1 Bm7351h.1   [unknown]
Transcript:Bm7351i.1 Bm7351i.1   [unknown]
Transcript:Bm7351b.1 Bm7351b.1   [unknown]
Transcript:Bm7351a.1 Bm7351a.1   [unknown]
Transcript:Bm7351c.1 Bm7351c.1   [unknown]
Transcript:Bm7351d.1 Bm7351d.1   [unknown]
Transcript:Bm7351e.1 Bm7351e.1   [unknown]
Transcript:Bm7351n.1 Bm7351n.1   [unknown]
Transcript:Bm7351o.1 Bm7351o.1   [unknown]
Transcript:Bm7351p.1 Bm7351p.1   [unknown]
Transcript:Bm7351j.1 Bm7351j.1   [unknown]
Transcript:Bm7351k.1 Bm7351k.1   [unknown]
Transcript:Bm7351l.1 Bm7351l.1   [unknown]
Transcript:Bm7351m.1 Bm7351m.1   [unknown]
 

Other

16 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm7351o Bm7351o   [unknown]
CDS:Bm7351p Bm7351p   [unknown]
CDS:Bm7351k Bm7351k   [unknown]
CDS:Bm7351l Bm7351l   [unknown]
CDS:Bm7351m Bm7351m   [unknown]
CDS:Bm7351n Bm7351n   [unknown]
CDS:Bm7351g Bm7351g   [unknown]
CDS:Bm7351h Bm7351h   [unknown]
CDS:Bm7351i Bm7351i   [unknown]
CDS:Bm7351j Bm7351j   [unknown]
CDS:Bm7351c Bm7351c   [unknown]
CDS:Bm7351d Bm7351d   [unknown]
CDS:Bm7351e Bm7351e   [unknown]
CDS:Bm7351f Bm7351f   [unknown]
CDS:Bm7351a Bm7351a   [unknown]
CDS:Bm7351b Bm7351b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

9 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated
  Transcripts that showed significantly higher expression in L4 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Adult_Upregulated
  Transcripts that showed significantly decreased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F120_vs_F30
  Transcripts that showed significantly higher expression in L4 larva comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Micro_Upregulated
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_M30
  Transcripts that showed significantly decreased expression in male B. malayi 30 days after infecting gerbils, comparing to female B. malayi 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M30_vs_F30
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to 42 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_M42
  Transcripts that showed significantly decreased expression in female B. malayi 30 days after infecting gerbils, comparing to L4 female B. malayi animals. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F30_vs_L4

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term