WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00278443 Gene Name  Ppa-vps-16
Sequence Name  ? PPA40074 Organism  Pristionchus pacificus
Automated Description  Predicted to be involved in intracellular protein transport and vacuole organization. Predicted to be located in cytoplasm. Is an ortholog of C. elegans vps-16. In C. elegans, vps-16 is involved in digestive tract development and embryo development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA40074.1 PPA40074.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA40074 PPA40074   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term