WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC308.1e.1 Sequence Name  ZC308.1e.1
Length (nt)  2544   Chromosome Location  I: 6371389-6385084
Chromosome . Primary Identifier  I Chromosome Location . Start  6371389
Chromosome Location . End  6385084 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC308.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001596 gld-2 ZC308.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC308.1e ZC308.1e 2544   I: 6371389-6371506

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC308.1e.1 6371389 6385084 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16019   118   I: 6371389-6371506 Caenorhabditis elegans
Exon16022   85   I: 6371560-6371644 Caenorhabditis elegans
Exon16030   137   I: 6377543-6377679 Caenorhabditis elegans
Exon16035   113   I: 6377729-6377841 Caenorhabditis elegans
Exon16040   193   I: 6378512-6378704 Caenorhabditis elegans
Exon16047   200   I: 6382246-6382445 Caenorhabditis elegans
Exon16053   115   I: 6382970-6383084 Caenorhabditis elegans
Exon16059   306   I: 6383132-6383437 Caenorhabditis elegans
Exon16065   129   I: 6383515-6383643 Caenorhabditis elegans
Exon16071   592   I: 6383743-6384334 Caenorhabditis elegans
Exon16077   196   I: 6384436-6384631 Caenorhabditis elegans
Exon16083   263   I: 6384677-6384939 Caenorhabditis elegans
Exon16085   97   I: 6384988-6385084 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC308.1e.1 6371389 6385084 1

1 Sequence

Length
2544

1 Sequence Ontology Term

Identifier Name Description
transcript