WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC308.1c.1 Sequence Name  ZC308.1c.1
Length (nt)  4253   Chromosome Location  I: 6376660-6386189
Chromosome . Primary Identifier  I Chromosome Location . Start  6376660
Chromosome Location . End  6386189 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC308.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001596 gld-2 ZC308.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC308.1c ZC308.1c 3111   I: 6376697-6377466

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC308.1c.1 6376660 6386189 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16025   807   I: 6376660-6377466 Caenorhabditis elegans
Exon16029   137   I: 6377543-6377679 Caenorhabditis elegans
Exon16034   113   I: 6377729-6377841 Caenorhabditis elegans
Exon16039   193   I: 6378512-6378704 Caenorhabditis elegans
Exon16046   200   I: 6382246-6382445 Caenorhabditis elegans
Exon16052   115   I: 6382970-6383084 Caenorhabditis elegans
Exon16058   306   I: 6383132-6383437 Caenorhabditis elegans
Exon16064   129   I: 6383515-6383643 Caenorhabditis elegans
Exon16070   592   I: 6383743-6384334 Caenorhabditis elegans
Exon16076   196   I: 6384436-6384631 Caenorhabditis elegans
Exon16082   263   I: 6384677-6384939 Caenorhabditis elegans
Exon16088   1202   I: 6384988-6386189 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC308.1c.1 6376660 6386189 1

1 Sequence

Length
4253

1 Sequence Ontology Term

Identifier Name Description
transcript