WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y113G7B.5b.1 Sequence Name  Y113G7B.5b.1
Length (nt)  1151   Chromosome Location  V: 20199262-20200640
Chromosome . Primary Identifier  V Chromosome Location . Start  20199262
Chromosome Location . End  20200640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001482 fog-2 Y113G7B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.5b Y113G7B.5b 984   V: 20199294-20199334

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.5b.1 20199262 20200640 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219141   73   V: 20199262-20199334 Caenorhabditis elegans
Exon219143   78   V: 20199466-20199543 Caenorhabditis elegans
Exon219145   640   V: 20199591-20200230 Caenorhabditis elegans
Exon219147   360   V: 20200281-20200640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.5b.1 20199262 20200640 1

1 Sequence

Length
1151

1 Sequence Ontology Term

Identifier Name Description
transcript