Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:H12C20.7.1 | H12C20.7.1 |
1539
 |
V: 11570690-11572990 |
Other
1 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:H12C20.7 | H12C20.7 |
330
|
V: 11571876-11572063 |
34 Allele
| Public Name |
|---|
| gk963271 |
| gk963301 |
| gk964458 |
| gk964459 |
| gk964451 |
| gk964452 |
| gk963618 |
| WBVar02061084 |
| WBVar02061085 |
| gk964054 |
| gk964055 |
| gk924485 |
| gk922594 |
| gk788112 |
| gk399877 |
| gk898808 |
| gk702060 |
| gk884053 |
| gk526067 |
| gk772123 |
| gk565818 |
| gk684084 |
| gk522481 |
| WBVar01866003 |
| WBVar01866002 |
| WBVar01866004 |
| gk963342 |
| tm11312 |
| WBVar01743575 |
| gk586 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00305173 | 11570690 | 11572990 | -1 |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly altered expression after 24 hour exposure to nitroguanidine (NQ). | Multivariate permutation tests with random variance model implemented in BRB-Array Tools version 4.5 were performed to infer differentially expressed genes (DEGs). One thousand random permutations were computed per chemical class (i.e., a group of 16 arrays or samples). The confidence level of false discovery rate assessment was set at 80%, and the maximum allowed portion of false-positive genes was 10%. | WBPaper00055899:nitroguanidine_regulated | |
| Genes that showed significant differential expressed between control and 150 mg\/L Atrazine treatment. | t-test, p < 0.05. | WBPaper00036123:Atrazine_regulated | |
| Bacteria diet: Comamonas sp. DA1877 | Genes downregulated on Comamonas DA1877 relative to E. coli OP50, Gravid adult stage | Moderated T statistics in Limma was used to calculate significance. Significance was determined using an adjusted p value. Changes in gene expression that were 2-fold (p < 0.001) or greater were considered significantly changed. | WBPaper00042258:DA1877_downregulated_GravidAdult |