WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE03253 Name  HIS-40
Molecular Weight (kDa)  15.3 Length  136
Organism  Caenorhabditis elegans MD5 Checksum  54840a1f6cd0d8af8ad8280da461684b
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
136
 

Other

0 Synonyms

15 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK131.7 ZK131.7 411   II: 13820210-13820620
CDS:ZK131.2 ZK131.2 411   II: 13824849-13825259
CDS:F08G2.3 F08G2.3 411   II: 13828287-13828697
CDS:B0035.10 B0035.10 411   IV: 11326588-11326998
CDS:K06C4.5 K06C4.5 411   V: 8897582-8897992
CDS:F07B7.5 F07B7.5 411   V: 8847943-8848353
CDS:F17E9.10 F17E9.10 411   IV: 8334305-8334715
CDS:F22B3.2 F22B3.2 411   IV: 11406451-11406861
CDS:F45F2.13 F45F2.13 411   V: 8534567-8534977
CDS:F54E12.1 F54E12.1 411   IV: 11337853-11338263
CDS:F55G1.2 F55G1.2 411   IV: 7488249-7488659
CDS:K03A1.1 K03A1.1 411   X: 7310110-7310520
CDS:K06C4.13 K06C4.13 411   V: 8890038-8890448
CDS:T10C6.13 T10C6.13 411   V: 16041873-16042283
CDS:ZK131.3 ZK131.3 411   II: 13823648-13824058

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

10 Motifs

WormBase ID
SUPERFAMILY:SSF47113
INTERPRO:IPR009072
PFAM:PF00125
INTERPRO:IPR007125
INTERPRO:IPR000164
PRINTS:PR00622
SMART:SM00428
HMMPANTHER:PTHR11426
SCANPROSITE:PS00322
SCANPROSITE:PS00959