WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE04501 Name  HIS-30
Molecular Weight (kDa)  13.4 Length  127
Organism  Caenorhabditis elegans MD5 Checksum  36d987909b0c429645dfb2fc9f431997
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
127
 

Other

0 Synonyms

16 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23D8.6 T23D8.6 384   I: 9989132-9989515
CDS:ZK131.6 ZK131.6 384   II: 13821198-13821581
CDS:F08G2.2 F08G2.2 384   II: 13827326-13827709
CDS:B0035.7 B0035.7 384   IV: 11324056-11324439
CDS:F07B7.10 F07B7.10 384   V: 8849788-8850171
CDS:F07B7.3 F07B7.3 384   V: 8853670-8854053
CDS:F17E9.13 F17E9.13 384   IV: 8335335-8335718
CDS:F35H10.1 F35H10.1 384   IV: 8331666-8332049
CDS:F45F2.4 F45F2.4 384   V: 8533379-8533762
CDS:F54E12.5a F54E12.5a 384   IV: 11340412-11340795
CDS:F55G1.10 F55G1.10 384   IV: 7485834-7486217
CDS:H02I12.7 H02I12.7 384   IV: 11401092-11401475
CDS:K06C4.3 K06C4.3 384   V: 8891883-8892266
CDS:K06C4.11 K06C4.11 384   V: 8895765-8896148
CDS:T10C6.12 T10C6.12 384   V: 16040808-16041191
CDS:ZK131.10 ZK131.10 384   II: 13817760-13818143

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

11 Motifs

WormBase ID
SUPERFAMILY:SSF47113
INTERPRO:IPR009072
PFAM:PF00125
INTERPRO:IPR007125
HMMPANTHER:PTHR23430
INTERPRO:IPR002119
INTERPRO:IPR032454
PRINTS:PR00620
SCANPROSITE:PS00046
SMART:SM00414
PFAM:PF16211