WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE01508 Name  SHN-1, isoform a
Molecular Weight (kDa)  122.6 Length  1110
Organism  Caenorhabditis elegans MD5 Checksum  eda64f3ff6e51ec4214d06a63b3e2cbf
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1110
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33B4.3a C33B4.3a 3333   II: 11384925-11385154

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

21 Motifs

WormBase ID
PFAM:PF12796
SUPERFAMILY:SSF48403
INTERPRO:IPR002110
PFSCAN:PS50088
SMART:SM00248
PFSCAN:PS50297
INTERPRO:IPR036770
INTERPRO:IPR001478
PFAM:PF00595
SUPERFAMILY:SSF50156
INTERPRO:IPR036034
PFSCAN:PS50106
SMART:SM00228
INTERPRO:IPR001660
PFSCAN:PS50105
SUPERFAMILY:SSF47769
SMART:SM00454
INTERPRO:IPR013761
PFAM:PF00536
HMMPANTHER:PTHR24135
INTERPRO:IPR051569