WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE02806 Name  MSP-65
Molecular Weight (kDa)  14.2 Length  127
Organism  Caenorhabditis elegans MD5 Checksum  5db2d80d55c32a72bde993a6bbeeb488
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
127
 

Other

0 Synonyms

13 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F11.4 C34F11.4 384   II: 5199797-5200180
CDS:K05F1.2 K05F1.2 384   II: 5797927-5798310
CDS:ZK1248.6 ZK1248.6 384   II: 5809947-5810330
CDS:R13H9.4 R13H9.4 384   IV: 5064678-5065061
CDS:ZK354.4 ZK354.4 384   IV: 5297962-5298345
CDS:K07F5.1 K07F5.1 384   IV: 9836034-9836417
CDS:C33F10.9 C33F10.9 384   II: 4825414-4825797
CDS:F36H12.7 F36H12.7 384   IV: 5260589-5260972
CDS:F58A6.8 F58A6.8 384   II: 5156700-5157083
CDS:R05F9.13 R05F9.13 384   II: 4916179-4916562
CDS:ZK354.1 ZK354.1 384   IV: 5316523-5316906
CDS:ZK354.5 ZK354.5 384   IV: 5294957-5295340
CDS:ZK354.11 ZK354.11 384   IV: 5312728-5313111

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

8 Motifs

WormBase ID
INTERPRO:IPR013783
PFAM:PF00635
SUPERFAMILY:SSF49354
INTERPRO:IPR000535
INTERPRO:IPR008962
PFSCAN:PS50202
HMMPANTHER:PTHR22920
INTERPRO:IPR051155