WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE00122 Name  PRP-8
Molecular Weight (kDa)  272.0 Length  2329
Organism  Caenorhabditis elegans MD5 Checksum  6436aa33d6fbd4c34f5db72ff9330d47
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
2329
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50C3.6 C50C3.6 6990   III: 8164377-8165206

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

25 Motifs

WormBase ID
INTERPRO:IPR012337
SUPERFAMILY:SSF53098
INTERPRO:IPR019580
INTERPRO:IPR019581
INTERPRO:IPR019582
PFSCAN:PS50249
SMART:SM00232
INTERPRO:IPR000555
PFAM:PF01398
INTERPRO:IPR021983
INTERPRO:IPR027652
HMMPANTHER:PTHR11140
PFAM:PF12134
INTERPRO:IPR043172
INTERPRO:IPR043173
PFAM:PF10596
PFAM:PF08082
PFAM:PF08084
PFAM:PF10598
PFAM:PF10597
PFAM:PF08083
INTERPRO:IPR012591
INTERPRO:IPR012592
INTERPRO:IPR012984
INTERPRO:IPR042516