WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE53088 Name  PDZD-8, isoform h
Molecular Weight (kDa)  146.6 Length  1325
Organism  Caenorhabditis elegans MD5 Checksum  0478a9adcdd83426bb5fce6360e2ec5d
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1325
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B4.4h C53B4.4h 3978   IV: 8975637-8975681

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

15 Motifs

WormBase ID
PFSCAN:PS50081
SMART:SM00109
INTERPRO:IPR046349
SUPERFAMILY:SSF57889
INTERPRO:IPR002219
INTERPRO:IPR001478
SUPERFAMILY:SSF50156
INTERPRO:IPR036034
PFSCAN:PS50106
SMART:SM00228
PFAM:PF17820
INTERPRO:IPR041489
PFSCAN:PS51847
HMMPANTHER:PTHR21519
INTERPRO:IPR039275