WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE26678 Name  MSH-5, isoform a
Molecular Weight (kDa)  153.1 Length  1369
Organism  Caenorhabditis elegans MD5 Checksum  0d54260f208c58aced9c383ed6692f2f
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1369
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E8.3a F09E8.3a 4110   IV: 13155233-13155386

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

15 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
HMMPANTHER:PTHR11361
PFAM:PF00488
PFAM:PF05192
SCANPROSITE:PS00486
SMART:SM00534
SMART:SM00533
INTERPRO:IPR036187
SUPERFAMILY:SSF48334
INTERPRO:IPR000432
INTERPRO:IPR007696
INTERPRO:IPR045076
PFAM:PF05190
INTERPRO:IPR007861