WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE50887 Name  TIR-1, isoform g
Molecular Weight (kDa)  104.3 Length  927
Organism  Caenorhabditis elegans MD5 Checksum  258a86d9ec33bcad2597b783ba19bc2b
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
927
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B10.1g F13B10.1g 2784   III: 3870183-3870268

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

20 Motifs

WormBase ID
Active_site
INTERPRO:IPR016024
SUPERFAMILY:SSF48371
INTERPRO:IPR011989
INTERPRO:IPR001660
PFSCAN:PS50105
SUPERFAMILY:SSF47769
SMART:SM00454
PFAM:PF07647
INTERPRO:IPR013761
PFAM:PF00536
PFAM:PF13676
SUPERFAMILY:SSF52200
INTERPRO:IPR000157
INTERPRO:IPR035897
HMMPANTHER:PTHR22998
PFSCAN:PS50104
SMART:SM00255
INTERPRO:IPR039184
ProteomeXchange_PXD032260:F13B10.1g